| -rwxr-xr-x | 2064 | root |
root |
/usr/bin/g3-from-scratch.csh
|
| -rwxr-xr-x | 2578 | root |
root |
/usr/bin/g3-from-training.csh
|
| -rwxr-xr-x | 3764 | root |
root |
/usr/bin/g3-iterated.csh
|
| lrwxrwxrwx | 28 | root |
root |
/usr/bin/glimmer3
|
| drwxr-xr-x | 4096 | root |
root |
/usr/libexec/glimmer3
|
| -rwxr-xr-x | 34748 | root |
root |
/usr/libexec/glimmer3/anomaly
|
| -rwxr-xr-x | 56376 | root |
root |
/usr/libexec/glimmer3/build-fixed
|
| -rwxr-xr-x | 59568 | root |
root |
/usr/libexec/glimmer3/build-icm
|
| -rwxr-xr-x | 30728 | root |
root |
/usr/libexec/glimmer3/entropy-profile
|
| -rwxr-xr-x | 35236 | root |
root |
/usr/libexec/glimmer3/entropy-score
|
| -rwxr-xr-x | 32032 | root |
root |
/usr/libexec/glimmer3/extract
|
| -rwxr-xr-x | 121568 | root |
root |
/usr/libexec/glimmer3/glimmer3
|
| -rwxr-xr-x | 60672 | root |
root |
/usr/libexec/glimmer3/long-orfs
|
| -rwxr-xr-x | 35652 | root |
root |
/usr/libexec/glimmer3/multi-extract
|
| -rwxr-xr-x | 55208 | root |
root |
/usr/libexec/glimmer3/score-fixed
|
| -rwxr-xr-x | 34924 | root |
root |
/usr/libexec/glimmer3/start-codon-distrib
|
| -rwxr-xr-x | 19456 | root |
root |
/usr/libexec/glimmer3/uncovered
|
| -rwxr-xr-x | 14612 | root |
root |
/usr/libexec/glimmer3/window-acgt
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/glimmer3
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/doc/glimmer-3.02
|
| -rw-r--r-- | 5075 | root |
root |
/usr/share/doc/glimmer-3.02/LICENSE
|
| -rw-r--r-- | 148346 | root |
root |
/usr/share/doc/glimmer-3.02/glim302notes.pdf
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run
|
| -rw-r--r-- | 963517 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.detail
|
| -rw-r--r-- | 1426812 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.icm
|
| -rw-r--r-- | 17476 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.longorfs
|
| -rw-r--r-- | 42735 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.predict
|
| -rw-r--r-- | 702353 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.train
|
| -rw-r--r-- | 963564 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-training.detail
|
| -rw-r--r-- | 1428748 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-training.icm
|
| -rw-r--r-- | 202 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-training.motif
|
| -rw-r--r-- | 44375 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-training.predict
|
| -rw-r--r-- | 695385 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-training.train
|
| -rw-r--r-- | 32806 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/from-training.upstream
|
| -rw-r--r-- | 42640 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.coords
|
| -rw-r--r-- | 963544 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.detail
|
| -rw-r--r-- | 1426812 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.icm
|
| -rw-r--r-- | 17476 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.longorfs
|
| -rw-r--r-- | 202 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.motif
|
| -rw-r--r-- | 44335 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.predict
|
| -rw-r--r-- | 963510 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.run1.detail
|
| -rw-r--r-- | 42735 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.run1.predict
|
| -rw-r--r-- | 702353 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.train
|
| -rw-r--r-- | 62928 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/iterated.upstream
|
| -rw-r--r-- | 1154364 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/tpall.fna
|
| -rw-r--r-- | 40523 | root |
root |
/usr/share/doc/glimmer-3.02/sample-run/tpall.nh
|
| -rwxr-xr-x | 646 | root |
root |
/usr/share/glimmer3/get-motif-counts.awk
|
| -rwxr-xr-x | 3475 | root |
root |
/usr/share/glimmer3/glim-diff.awk
|
| -rwxr-xr-x | 940 | root |
root |
/usr/share/glimmer3/match-list-col.awk
|
| -rwxr-xr-x | 974 | root |
root |
/usr/share/glimmer3/not-acgt.awk
|
| -rwxr-xr-x | 1929 | root |
root |
/usr/share/glimmer3/upstream-coords.awk
|
