- Name: R-vsn
- Version: 3.22.0
- Release: 1
- Epoch:
- Group: Sciences/Mathematics
- License: Artistic-2.0
- Url: http://bioconductor.org/packages/release/bioc/html/vsn.html
- Summary: Variance stabilization and calibration for microarray data
- Architecture: i586
- Size: 2244473
- Distribution: Mandriva Linux
- Vendor: Mandriva
- Packager: Paulo Andrade <pcpa@mandriva.com.br>
Description:
The package implements a method for normalising microarray intensities,
both between colours within array, and between arrays. The method uses a
robust variant of the maximum-likelihood estimator for the stochastic
model of microarray data described in the references (see vignette). The
model incorporates data calibration (a.k.a. normalization), a model for
the dependence of the variance on the mean intensity, and a variance
stabilizing data transformation. Differences between transformed
intensities are analogous to "normalized log-ratios". However, in contrast
to the latter, their variance is independent of the mean, and they are
usually more sensitive and specific in detecting differential
- OptFlags: -O2 -Wa,--compress-debug-sections -gdwarf-4 -fvar-tracking-assignments -frecord-gcc-switches -Wstrict-aliasing=2 -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fomit-frame-pointer -mtune=generic -march=i586 -fasynchronous-unwind-tables
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- Buildhost: n8.mandriva.com
Sources packages:
Other version of this rpm: